Have the SOs been invoiced? The tracking info jumps to the invoice when posting occurs.

OK - Found the bug.  Bring in the sales order from the EDI module.....Release the Sales order.  At this point, if you do a DE-P-E and export the Acknowledgement, the file written out Sxxxx.out will contain the SONOTE tracking number line.  If you then print and post the invoice and then export the invoice (Ixxxx.out) the SONOTE tracking number line disappears!!  
 
Our typical order of events would be to bring in the sales order from the EDI module into a real sales order, then export the acknoledgement into an Sxxxx.out file for translation into the 855 EDI Acknowledgment.  We then finish filling the order, release the sales order, print the invoice and post it.  We then export the Ixxxx.out file and use it to translate to the 856 Packing slip and 810 Invoice.  Our problem is we NEED the tracking number line in the Ixxxx.out file to populate the bill of lading number in the 855 EDI file.
 
Would this be a simple fix Allen??

Allen,
 
Excellent! When do you think the next post will be?  I can sort of work around it for further testing with our trading partner if need be (if it will be weeks rather than days).